The also targeted the IT side, not the operational side, which, according to the article is likely to be airgapped. Even sensitive production facilities need some internet access, people work there and like everyone else, they need food, office supplies, toilet paper, etc... they can't be cut off the rest of the world completely.
Not having internet access at all is like not having your building connected to public roads. That makes it harder (but not impossible) for bad guys to come, but it is so much of a hassle that almost no one does that. Instead, they use gates and checkpoints.
Same idea for internet access. They have internet access, but they have security systems, from traditional firewalls and VPNs to airgaps.
Security is about letting the good guys in while keeping the bad guys out, the latter is meaningless without the former. That's why security is hard, if is was just about blocking everything, it would be easy, but nothing would be done.