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331 points breve | 36 comments | | HN request time: 0.954s | source | bottom
1. giancarlostoro ◴[] No.45027158[source]
Wont viruses just adapt and now we've got worse viruses as a result? Isn't this kind of why doctors don't like to prescribe antibiotics too often, because they become ineffective in the long run.

I'm genuinely asking, I'm a simple software dev not a doctor.

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2. kristjank ◴[] No.45027269[source]
Antibiotics are related to bacteria, which have different mutation mechanisms than viruses. I'm also a tech guy, so someone may correct me. Also, this seems to influence the human end to make protective material, not act on the viruses directly.
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3. thyristan ◴[] No.45027317[source]
Maybe, maybe not. Antibiotic resistance develops because antibiotics are only somewhat deadly to bacteria, so natural selection can occur and bacteria develop resistance over time. There are some antibiotic/bacteria combinations where this doesn't happen, because the respective antibiotic is so deadly to that special kind of bacteria, that no survivors can pass on their slightly increased resistance.

And bacteria self-replicate, whereas a virus needs to infect a cell and be reproduced by that cell. Some antiviral mechanisms attack the reproduction proteins that the human cells use, which the virus cannot do without. And the human cells don't have reproductive pressure to replicate viruses, quite the contrary.

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4. aredox ◴[] No.45027344[source]
1) Viruses don't adapt instantly nor perfectly - that's why viruses can be animal-specific. Influenza (or recently SARS-CoV) are famous because they are malleable enough to adapt to new hosts, human or animal, within a few months or years, but not all viruses have this ability.

2) To further illustrate, some viruses have been nearly eliminated with a single vaccine. Polio didn't manage to adapt before going almost extinct. And a good reason why is:

3) Viruses can only evolve inside contaminated hosts. If you find a cure that stops quickly the virus from multiplying and contaminating, you are also curtailing its ability to adapt. A contaminated host is a giant casino machine, allowing the virus to mutate until it hits a new evolutionary step. A strong enough vaccine or treatment is like throwing out the virus before it has time to play much.

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5. busyant ◴[] No.45027350[source]
Viruses can acquire resistance by mutation. This has been well established for decades.

FWIW, I was trained as a bacterial geneticist and routinely used bacteriophage (viruses that infect bacteria) with various resistance mutations.

Viral mutations are not restricted to viruses that infect bacteria.

edit: in fact, fundamental aspects of the genetic code were determined by analyzing and exploiting viral mutations.

https://en.wikipedia.org/wiki/Crick,_Brenner_et_al._experime...

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6. grapesodaaaaa ◴[] No.45027508[source]
Is it really true that we have “worse” viruses, or that they are adapting to our modern antibiotic regime & reverting to the status quo?
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7. 15155 ◴[] No.45027573{3}[source]
What's the purpose of annual flu vaccination programs if "viruses do not mutate!"?
8. XorNot ◴[] No.45027594[source]
Antibiotics have never killed any viruses ever. They are exclusively for treating bacterial infections (which are generally worse by a lot).
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9. tialaramex ◴[] No.45027617[source]
Two viruses have been entirely eliminated in the wild, one (Smallpox) still exists in government research facilities the other (Rinderpest) I believe is just gone because it wasn't useful as a direct weapon (humans aren't affected) and nobody actually wants Rinderpest, it was just killing cattle and while poor farmers need their cattle or they'll starve the rich want to drink milk and eat steak so they weren't keen on this virus either and helped fund its eradication.
10. quotemstr ◴[] No.45027794[source]
Of course. Given unlimited time, viruses will develop resistance. Resistance = evolution = descent + modification + selection. You can quibble about whether viruses are alive, but they definitely evolve.

But so what? Anti-pathogen drugs are useful in the period during which resistance hasn't become universal, and if and when it comes a problem, we'll have other drugs.

Besides: sometimes you get lucky and the virus goes extinct before it can develop resistance (e.g. smallpox)

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11. quotemstr ◴[] No.45027815{4}[source]
I'm honestly confused about what the OP could be getting out of a drive by comment so obviously and verifiably wrong. Seems like a poor use for even cheap AI inference tokens. It doesn't even have trolling value.

Is it so wrong of me to demand competence of my spammers?

12. tiahura ◴[] No.45028205{3}[source]
Azithromycin (rhinovirus, influenza A, Zika), clarithromycin (influenza A, rhinovirus), doxycycline (dengue, Zika), minocycline (West Nile), teicoplanin/dalbavancin (Ebola, MERS/SARS-CoV and SARS-CoV-2), rifampin/rifamycins (orthopoxviruses), aminoglycosides (HSV-2, influenza A, Zika), salinomycin/monensin (influenza A/B, coronaviruses incl. SARS-CoV-2), nanchangmycin (Zika, West Nile, dengue, chikungunya), nitroxoline (mpox), and some fluoroquinolones have all shown antiviral properties.

And no, strep throat is not worse than ebola.

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13. MengerSponge ◴[] No.45028563[source]
That's not really true. Evolution is constrained by physics, so while bacteria can evolve to live in 100C water, they can't evolve to live in molten magma, or the surface of the sun. Similarly, they can evolve to live off of isopropyl alcohol, but they can't evolve resistance to sufficiently concentrated bleach (sodium hypochlorite).
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14. bee_rider ◴[] No.45028764{4}[source]
I think they used “generally” on purpose, to make a general observation. Of course, there exist viral infections that are worse than the most common bacterial ones.

There’s some ambiguity in their comment because it isn’t obvious what we’re sort of… averaging over, but I think they clearly don’t mean that there no serious viral infections exist.

15. francisofascii ◴[] No.45029015[source]
Is a fair analogy, antibiotics kill, whereas antivirals use birth control? So viruses would have to find a way to circumvent the replication inhibitors or potentially find a noval way to replicate.
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16. capitainenemo ◴[] No.45029111{3}[source]
I'm not sure what you consider "sufficiently concentrated" but some existing viruses (which form spores) can already survive a 1% sodium hypochlorite solution cleaning, which is pretty crazy-high. At that point you're risking damage to surfaces/skin. Doesn't seem impossible it could go higher if bleach exposure was consistently selected for.
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17. busyant ◴[] No.45029483{3}[source]
OT: Just replying to myself to ramble a little bit more.

The Crick, Brenner et al. paper that I cited above

* studied mutations in a viral gene called "rIIB"

* the authors used those rIIB mutations to determine that the genetic code was a non-overlapping triplet (now called codons) -- a pretty fundamental discovery.

* What's amazing to me is that they still have NO IDEA what the rIIB gene actually _does_, mechanistically.

It's like learning a little bit about God using an enigma machine (sorry, shitty simile).

18. mschuster91 ◴[] No.45030077[source]
> A contaminated host is a giant casino machine, allowing the virus to mutate until it hits a new evolutionary step.

And even worse, some viruses can swap genes if a host has multiple infections at a given time. Bats in particular are known as "hot pots".

19. glenstein ◴[] No.45030709{4}[source]
Surviving in 1% bleach doesn't demonstrate the supremacy of evolution over physical constraints, and it's important to keep the eye on the ball of what this whole point was about. There are circumstances such as the temperature of the Sun, where DNA, or any molecular structure, or even atoms, can't hold together, and so there's no evolutionary pathways that can iterate toward survival. You can't have molecular biology without molecules.

It's an extreme example, but it demonstrates a fundamental constraint that can't be evolved around. Ideally vaccines can find an equivalent in the space of mechanistic interactions that cut off any evolutionary pathway a virus could reach, either exterminating the virus before it has enough time to complete the search, or by genuinely leaving no pathway even with infinite searching.

Contrary to what you may have heard from Jeff Goldblum life does not always find a way.

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20. capitainenemo ◴[] No.45031028{5}[source]
Yeah, wasn't disagreeing with fundamental premise, just picking on the bleach bit.
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21. strbean ◴[] No.45032123{3}[source]
Some classes of antibiotics use birth control - rather than killing bacteria directly, they inhibit reproduction.

I think the biggest difference is that bacteria can react to a treatment, while viruses don't have the capacity to react. If you've stopped a virus from replicating, it's essentially dead. A bacterium may have defensive measures it can take. It could form an endospore and try to wait things out. If you've stopped it from reproducing, as it ages it might start accumulating free radicals that increase DNA damage, leading to a higher chance of it mutating to resist the antibiotic. Etc.

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22. etiam ◴[] No.45032479[source]
Correct.

And the really, really bad part about abusing natural parts if the immune system to provoke pathogen resistance against them is that the resistance will target part of natural immunity.

See also https://news.ycombinator.com/item?id=35700881

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23. jojobas ◴[] No.45032529[source]
Antibiotic resistance costs bacteria dearly. The proteins they lose (typically related to cell membrane building) are honed by millions of years of evolution. The resistance mutations end up being inferior, slowing down growth and perhaps other capabilities.
24. Terr_ ◴[] No.45033894{4}[source]
> I think the biggest difference is that bacteria can react to a treatment, while viruses don't have the capacity to react.

Bacteria also swap genes between themselves [0], whereas two viral particles sitting on the same Petri dish are too inert/simple for that. That represents an additional way for adaptive tricks to spread.

https://en.wikipedia.org/wiki/Horizontal_gene_transfer

25. 0xDEAFBEAD ◴[] No.45034185[source]
My understanding is that there's often at tradeoff between fitness and antiviral resistance. The virus starts on a fitness local maximum, and it has to pay a fitness cost as it evolves resistance to the antiviral (due to stepping off the local maximum). If the antiviral is ineffective, and the virus continues reproducing, over time it will evolve "compensatory mutations" which allow it to regain some or all of the lost fitness.

Based on my recollections of this paper https://pmc.ncbi.nlm.nih.gov/articles/PMC5499642/

So yeah, I wouldn't be super worried about the virus evolving to become worse in absolute terms as a result of antiviral exposure. Virii are evolving all the time anyways. Antivirals can also reduce evolution speed by fighting an infection: A more severe infection means more virions means greater evolution speed. I believe some new COVID variants were thought to have evolved in the body of someone who was severely infected. (However: Note that it's not necessarily beneficial for fitness for the virus to evolve greater infection severity, especially if that interferes with transmission.)

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26. 0xDEAFBEAD ◴[] No.45034188[source]
Don't viruses evolve to evade the immune system anyways though?
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27. tempestn ◴[] No.45036303[source]
Same deal with vaccination, right? We saw this with covid; as new variants evolved to evade the vaccines, they tended to result in less severe infections (even to the unvaccinated) than the original.
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28. ted_dunning ◴[] No.45036393{3}[source]
Citation?

I think (also without a citation) that this was never properly demonstrated.

And there is nearly nobody left who has no immunity from either infection or injection. We are definitely still seeing quite a few deaths from COVID.

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29. ted_dunning ◴[] No.45036427{4}[source]
Citations?

The examples that you gave that I checked were not supportive of your assertions.

30. etiam ◴[] No.45036477{3}[source]
Normally they don't get to try that with a strong selection pressure for a handling a particular monoculture.

Admittedly the method in the present article is probably better than the idiocy of extracting antibacterial peptides from context for use as drug products, since at least this will always be used in the context of a full immune system and they trigger a number of genes which probably regulate a whole subcomponent of measures rather than just one or two mechanisms.

Even so, it lifts up a particular part from the diffuse field of defenses as salient and particularly worthwhile to defeat.

Also, keep in mind that many species of virus have so small genomes they have to overload the readings of parts of the nucleic acid sequences to get a full set of proteins.

Evolve to evade the immune system, certainly. But if you're implying that it will happen in the same ways, at anything like the same rate and to the same extent regardless of what we do, no that's not right.

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31. 0xDEAFBEAD ◴[] No.45036538{4}[source]
Interesting. Not sure I buy it though.

By your logic, we'd be better off if we gave patients a cocktail containing small amounts of many different antibiotics. By giving a single antibiotic in a large dose, we are "lifting up a particular part of our field of defenses as salient and particularly worthwhile to defeat". Sounds bad.

Willing to bite the bullet and sign on to this kitchen-sink approach, of offering patients a cocktail containing small amounts of many antibiotics?

The problem I see with the cocktail approach is that a pathogen can gradually evolve defenses against everything simultaneously, in parallel. With a cocktail, every element of the cocktail provides a distinct glide path for a virus to increase its contextual fitness. That also sounds bad! The main way I see this situation improving is if two elements of the cocktail happen to act as a sort of clamp, where any virus which begins to defeat one ends up increasing the effectiveness of the other.

32. cwmma ◴[] No.45038594[source]
Probably, currently it's just 15 people that have it, but if you started giving it to more people there would be incredible advantages to any virus that could adapt and viruses mutate fast.
33. MengerSponge ◴[] No.45039102{6}[source]
My sentence construction was a little ornate but the antecedent was "bacteria", not "viruses and bacteria and anything else you can imagine"
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34. tempestn ◴[] No.45043768{4}[source]
After some reading, it appears it's more of a mixed bag. Evolutionary pressure from vaccines can have that effect, as appears to have been the case with Omicron, but it's not guaranteed, and some variants appear to have been more virulent than the original virus. See the "Relative Severity of Variants" section of this paper: https://www.nature.com/articles/s41579-022-00841-7?utm_sourc...
35. capitainenemo ◴[] No.45057297{7}[source]
Well you're in luck because I said virus (accidentally) but I really meant "bacteria" - I don't think viruses can form spores, but who knows what we'll find. There are a lot of hijackings of cellular machinery that happen, and maybe we'll find one that uses a bacterial spore as a stealth capsule.

There are indeed bacteria which can survive high bleach concentrations. It was a minor nitpick.

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36. MengerSponge ◴[] No.45070350{8}[source]
I wound up reading about some particularly resilient strains of c diff and wow, that's spooky stuff.

But I bet if you weren't worried about etching or skin safety you could find a concentration that would handle those little buggers. It's the sterilization equivalent of "It can't be stuck if it's liquid"