... Okay, but you already acknowledged that
> The process will be slow, but it will happen (this is not the same as saying schizophrenia itself can be eliminated, since it is highly polygenic and the pool of risk genes is not static).
So how do we know that modern-day schizophrenia isn't caused by a different set of genes? Maybe the Neolithic ones have been dying out from the gene pool, but new ones have consistently managed to keep replacing them. New genes can start contributing to the incidence of schizophrenia right away; even if they're otherwise neutral, they but won't die out due to the marginal effect on schizophrenia incidence for a very long time (much longer than the calculation above - since each one is, as we already established, causing only part of the loss in reproductive fitness). They don't need to be under positive selection, unless I've misunderstood something.